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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6192038_6194405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6192038 - 6194405

Intron Length:

2368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAG

5'SS Class:

major

3'SS Sequence:

TTTTTTGCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTGCTT

Flanking Amino Acid:

DDTSDRKNKSEAEKVAVVNA

Intron Amino Acid Position:

1349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

90.1

0.9

0.7

28.1

Minor 5ss

30.7

-2.2

3.1

38.3

46.6

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

QSER1

Ensembl Gene ID:

ENSAPLG00000006676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006932

6183838 - 6208618

24781

ENSAPLT00000041591

6183838 - 6203866

20029

ENSAPLT00000039527

6180704 - 6202816

22113