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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61952103_61960478_F

Intron Information:

Intron Rank:

143620

Intron Class:

major

Intron Phase:

Intron Coordinates:

61952103 - 61960478

Intron Length:

8376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GGATTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.9

0.9

0.7

29.3

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

52.9

0.17

1.5

65.61

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048082

61949633 - 61961088

11456

ENSAPLT00000047593

61950407 - 61961088

10682