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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6201430_6202683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6201430 - 6202683

Intron Length:

1254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACTGTC

5'SS Class:

major

3'SS Sequence:

CACCCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTGTTTAATT

Flanking Amino Acid:

PGYSTTHHPTGLSGIFDTSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

72.3

37.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

60.5

0.24

0.9

51.1

32.7

Minor 5ss

42.9

-0.8

3.2

57.9

42.1

Minor BPS

74.8

0.86

1.7

91.31

32.6

Associated Gene:

Gene:

QSER1

Ensembl Gene ID:

ENSAPLG00000006676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041591

6183838 - 6203866

20029

ENSAPLT00000039527

6180704 - 6202816

22113

ENSAPLT00000006932

6183838 - 6208618

24781