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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62080383_62085757_F

Intron Information:

Intron Rank:

134648

Intron Class:

major

Intron Phase:

Intron Coordinates:

62080383 - 62085757

Intron Length:

5375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAGGTATA

5'SS Class:

major

3'SS Sequence:

ATTTTATCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CCCATTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

72.1

39.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.8

0.69

0.8

78.6

34.3

Minor 5ss

40.1

-1.1

3.1

42.5

Minor BPS

46.9

-0.2

1.6

49.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029826

62078499 - 62086188

7690