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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62099731_62104837_F

Intron Information:

Intron Rank:

127950

Intron Class:

major

Intron Phase:

Intron Coordinates:

62099731 - 62104837

Intron Length:

5107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAACAAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

45.9

-0.2

1.4

51.1

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023804

62098049 - 62104995

6947