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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6217532_6217749_F

Intron Information:

Intron Rank:

129207

Intron Class:

major

Intron Phase:

Intron Coordinates:

6217532 - 6217749

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTTTC

5'SS Class:

major

3'SS Sequence:

TTGCCGTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ATGCACTGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

34.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

69.1

0.43

1.1

41.2

Minor 5ss

40.6

-1.1

2.9

49.1

41.3

Minor BPS

46.3

-0.4

1.8

51.19

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041477

6217416 - 6219033

1618