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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62251546_62275010_F

Intron Information:

Intron Rank:

137286

Intron Class:

major

Intron Phase:

Intron Coordinates:

62251546 - 62275010

Intron Length:

23465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ACTCCTTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

TGTTGTTCTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

79.4

0.66

0.8

73.3

30.9

Minor 5ss

38.8

-1.3

52.9

44.3

Minor BPS

47.5

-0.1

2.2

72.95

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020648

62251539 - 62276183

24645