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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62257029_62260435_F

Intron Information:

Intron Rank:

135969

Intron Class:

major

Intron Phase:

Intron Coordinates:

62257029 - 62260435

Intron Length:

3407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGAT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGAACCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

TCTCCCTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.9

27.7

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

62.1

0.27

0.9

53.8

34.3

Minor 5ss

28.3

-2.5

3.3

39.6

46.4

Minor BPS

71.2

0.64

1.4

77.11

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030303

62256851 - 62261011

4161