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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62276082_62281191_F

Intron Information:

Intron Rank:

137287

Intron Class:

major

Intron Phase:

Intron Coordinates:

62276082 - 62281191

Intron Length:

5110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CAAGCATTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.6

0.62

0.8

69.6

36.3

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

46.1

-0.3

1.9

53.55

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040927

62276080 - 62283564

7485