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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6231623_6232043_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

6231623 - 6232043

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGAG

5'SS Class:

major

3'SS Sequence:

GGGATTCACGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

GTGACTTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

63.9

42.4

Major BPS

68.7

0.46

71.3

Major PPT

58.2

0.18

1.1

42.9

Minor 5ss

27.2

-2.6

3.7

36.3

48.1

Minor BPS

-0

1.9

65.56

44.9

Associated Gene:

Gene:

PRRG4

Ensembl Gene ID:

ENSAPLG00000006630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006884

6225854 - 6232371

6518