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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62375803_62400384_F

Intron Information:

Intron Rank:

128456

Intron Class:

major

Intron Phase:

Intron Coordinates:

62375803 - 62400384

Intron Length:

24582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TACTGTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

89.9

0.9

0.7

88.6

28.1

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

52.5

0.16

72.42

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018959

62375533 - 62400400

24868