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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62470848_62567745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62470848 - 62567745

Intron Length:

96898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGGGTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGGTGCTCACCT

Flanking Amino Acid:

MHRGRAAAPPTVRIVHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

44.3

-0.3

2.2

60.43

48.7

Associated Gene:

Gene:

MDGA2

Ensembl Gene ID:

ENSAPLG00000014673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047264

62470826 - 62783744

312919

ENSAPLT00000015285

62470826 - 62784132

313307