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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62673998_62713109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62673998 - 62713109

Intron Length:

39112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

CTGTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAA

U12 Branch Point Sequence:

TAACACAAAGCT

Flanking Amino Acid:

REALVQLIVQYPPAVEPTFL

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

Major BPS

51.9

0.05

0.9

27.3

Major PPT

0.56

0.8

69.5

31.2

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

39.9

-0.6

2.1

58.23

43.6

Associated Gene:

Gene:

MDGA2

Ensembl Gene ID:

ENSAPLG00000014673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047264

62470826 - 62783744

312919

ENSAPLT00000015285

62470826 - 62784132

313307

ENSAPLT00000014802

62567669 - 62784132

216464