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Intron Name: Anas_platyrhynchos_platyrhynchos_5_62713380_62738305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62713380 - 62738305

Intron Length:

24926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTG

5'SS Class:

major

3'SS Sequence:

CTGTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTCCCTTTTTT

Flanking Amino Acid:

GAGRCSFLVTGKAYAPEFYY

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

76.7

0.6

0.8

30.9

Minor 5ss

40.1

-1.1

3.4

55.3

48.9

Minor BPS

45.4

-0.2

3.6

81.55

40.1

Associated Gene:

Gene:

MDGA2

Ensembl Gene ID:

ENSAPLG00000014673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047264

62470826 - 62783744

312919

ENSAPLT00000015285

62470826 - 62784132

313307

ENSAPLT00000014802

62567669 - 62784132

216464