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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6300205_6303102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6300205 - 6303102

Intron Length:

2898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTTTGTCAATC

Flanking Amino Acid:

DNVAKGEKGLGSISSNRAAD

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

75.6

0.58

75.5

38.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

54.4

0.12

2.2

73.85

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006601

6298839 - 6305775

6937