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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63150603_63150998_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63150603 - 63150998

Intron Length:
396

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACAGCA

5'SS Class:
major

3'SS Sequence:
TGCTGCCTTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAG

U12 Branch Point Sequence:
GCTGCCTTACAG

Flanking Amino Acid:
RFGSVKKMINSSPLDIATGA

Intron Amino Acid Position:
2131

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.1
68.7
36.4

Major BPS
46
-0.2
1.6
40.4
42.3

Major PPT
76.4
0.59
0.9
68.6
37.4

Minor 5ss
36.3
-1.6
3.3
48.6
47.1

Minor BPS
48.4
-0.2
1.9
52.97
47.4

Associated Gene:

Gene:
FANCM

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63150455 - 63222780
72326

63150455 - 63222780
72326