Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_63154563_63156087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63154563 - 63156087

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCAACCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAACC

Flanking Amino Acid:

AFNNTAIFSQIPEQDETYAE

Intron Amino Acid Position:

1714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

71.6

38.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.6

0.42

0.9

58.6

37.9

Minor 5ss

38.2

-1.3

3.4

56.2

Minor BPS

72.3

0.68

1.4

31.8

Associated Gene:

Gene:

FANCM

Ensembl Gene ID:

ENSAPLG00000011095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043453

63150455 - 63222780

72326

ENSAPLT00000011566

63150455 - 63222780

72326