Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_63221092_63221763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63221092 - 63221763

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCCG

5'SS Class:

major

3'SS Sequence:

TTCCAATTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTAACATGAAAC

Flanking Amino Acid:

KALGNHAYCQVVKELSKYTN

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

57.9

46.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

71.9

0.49

0.8

69.8

35.2

Minor 5ss

36.6

-1.5

3.3

48.4

47.3

Minor BPS

49.1

-0

1.8

64.4

39.8

Associated Gene:

Gene:

FANCM

Ensembl Gene ID:

ENSAPLG00000011095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043453

63150455 - 63222780

72326

ENSAPLT00000011566

63150455 - 63222780

72326