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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63224485_63225908_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
63224485 - 63225908

Intron Length:
1424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGC|GTAAGTAAA

5'SS Class:
major

3'SS Sequence:
GTTTTGTTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
TTGGTTTTATGT

Flanking Amino Acid:
KVGVGKVIRGWDEALLTMSK

Intron Amino Acid Position:
176

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.3
74.1
38.3

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
87.1
0.84
0.8
84.6
36

Minor 5ss
36
-1.6
2.7
37.8
40.1

Minor BPS
47.4
-0.1
1.9
66.16
45.4

Associated Gene:

Gene:
FKBP3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63222701 - 63226959
4259