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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63230643_63231199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63230643 - 63231199

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGAGT

5'SS Class:

major

3'SS Sequence:

AATAACTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TGTATAATAACT

Flanking Amino Acid:

QDSLKRRAENGSEEPDEKKM

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

64.3

47.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

71.2

0.48

62.8

42.9

Minor 5ss

32.2

-2

3.5

39.3

46.3

Minor BPS

51.5

0.13

1.9

75.88

39.9

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667

ENSAPLT00000042732

63229322 - 63240988

11667