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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63231275_63232719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63231275 - 63232719

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAACAA

U12 Branch Point Sequence:

TGGTGAACAAAG

Flanking Amino Acid:

FLEDFGSDVNKLLDAYDEHQ

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

48.7

-0

1.2

55.4

40.4

Major PPT

86.8

0.83

0.7

85.2

29.6

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

-1.2

2.2

40.26

42.8

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667

ENSAPLT00000042732

63229322 - 63240988

11667