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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63232905_63233466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63232905 - 63233466

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

GATACTTTATTT

Flanking Amino Acid:

VLSEAIEIDKENTKLYLNLL

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

80.7

31.7

Major BPS

75.1

0.62

65.6

Major PPT

88.7

0.87

0.6

84.5

23.5

Minor 5ss

46.4

-0.4

3.2

66.5

Minor BPS

56.6

0.28

1.6

70.63

40.5

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042732

63229322 - 63240988

11667

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667