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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63234431_63236556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63234431 - 63236556

Intron Length:

2126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCACTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TTAGTCATACGT

Flanking Amino Acid:

VSKRWTFEEGIKRPYFHVKP

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.7

33.5

Major BPS

0.67

1.1

77.7

37.1

Major PPT

76.6

0.6

0.9

69.7

35.9

Minor 5ss

-1.1

2.7

42.4

44.3

Minor BPS

43.8

-0.3

2.1

64.76

45.7

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042732

63229322 - 63240988

11667

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667