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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63236665_63237062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63236665 - 63237062

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACTTG

5'SS Class:

major

3'SS Sequence:

AATTGTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

GTEDITDPAKLITEIENMRH

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

63.2

43.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

70.2

0.46

66.6

44.2

Minor 5ss

45.7

-0.4

3.2

64.2

47.3

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667

ENSAPLT00000042732

63229322 - 63240988

11667