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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63238115_63238742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63238115 - 63238742

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

AATTACTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TCAACTGTAAAT

Flanking Amino Acid:

DDPETNNTIRGAYEHAVLAA

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

78.6

0.64

0.9

74.4

40.1

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

47.8

-0

2.1

66.53

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042732

63229322 - 63240988

11667

ENSAPLT00000039599

63229322 - 63239627

10306

ENSAPLT00000011249

63229322 - 63240988

11667