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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63239099_63239501_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

63239099 - 63239501

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTACCCCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TGGTCTGTACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

57.6

0.17

56.2

33.7

Minor 5ss

34.1

-1.8

2.9

42.6

44.2

Minor BPS

47.6

-0.2

2.2

62.28

43.6

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042732

63229322 - 63240988

11667