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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63239324_63239501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

63239324 - 63239501

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTGTAGCTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

0.65

76.3

37.7

Minor 5ss

34.1

-1.8

2.9

42.6

44.2

Minor BPS

-0.5

2.4

56.81

44.8

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039599

63229322 - 63239627

10306