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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63239628_63240614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63239628 - 63240614

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TTACCTTTCACT

Flanking Amino Acid:

VYLLQYVEQENHIPAARKAF

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

1.1

36.1

Major BPS

77.7

0.69

30.2

Major PPT

82.9

0.74

0.9

77.3

Minor 5ss

35.7

-1.6

2.6

42.8

44.1

Minor BPS

64.8

0.55

1.7

82.24

Associated Gene:

Gene:

PRPF39

Ensembl Gene ID:

ENSAPLG00000010785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042732

63229322 - 63240988

11667

ENSAPLT00000011249

63229322 - 63240988

11667