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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63242768_63244228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63242768 - 63244228

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GTTCCTGTCACA

Flanking Amino Acid:

AKQDITEKLADLVAELYPRK

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

70.3

0.46

0.9

64.5

35.7

Minor 5ss

36.2

-1.6

3.3

43.9

45.7

Minor BPS

46.8

-0.2

2.3

65.16

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011124

63242488 - 63270692

28205