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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63254442_63255189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

63254442 - 63255189

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATTATTTGAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

76.7

0.6

69.4

41.7

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

51.4

0.02

1.5

63.46

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011124

63242488 - 63270692

28205