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Intron Name: Anas_platyrhynchos_platyrhynchos_5_63258552_63259151_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

63258552 - 63259151

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

AAG|GTTTGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAT|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTACAG

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

66.1

39.4

Major BPS

47.5

-0.1

1.6

60.7

45.9

Major PPT

50.5

0.01

3.2

88.9

28.1

Minor 5ss

34.5

-1.8

2.9

40.4

45.9

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011124

63242488 - 63270692

28205