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Intron Name: Anas_platyrhynchos_platyrhynchos_5_637870_639847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

637870 - 639847

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACGAT

U12 Branch Point Sequence:

TGCTAGCTAACG

Flanking Amino Acid:

ESHKASKVADALQRANSFHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

54.2

0.11

1.3

52.8

42.7

Major PPT

71.9

0.49

41.4

Minor 5ss

38.2

-1.3

3.4

52.7

46.4

Minor BPS

43.2

-0.6

2.4

53.85

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016998

612390 - 642461

30072