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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6381228_6389978_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6381228 - 6389978

Intron Length:
8751

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGGCTC

5'SS Class:
major

3'SS Sequence:
TCTTTATTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
TCCTCTTTATTT

Flanking Amino Acid:
NQMNLGSTLKGHTAGYENEN

Intron Amino Acid Position:
232

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
67.8
43.5

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
89.4
0.89
0.7
84.1
29.7

Minor 5ss
34.9
-1.7
3.4
42.7
44.4

Minor BPS
63.1
0.49
1.6
74.81
43.2

Associated Gene:

Gene:
WT1

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6371705 - 6404837
33133

6372260 - 6415807
43548