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Intron Name: Anas_platyrhynchos_platyrhynchos_5_640022_642451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

640022 - 642451

Intron Length:

2430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTGAA

5'SS Class:

major

3'SS Sequence:

CTTTTCCCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTCTTCCCATCT

Flanking Amino Acid:

MQAALSWSLSLTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.4

35.6

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

82.7

0.74

0.7

78.1

23.8

Minor 5ss

30.7

-2.2

3.4

46.1

Minor BPS

47.4

-0.1

2.1

72.42

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016998

612390 - 642461

30072