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Intron Name: Anas_platyrhynchos_platyrhynchos_5_64121123_64122669_R

Intron Information:

Intron Rank:

138400

Intron Class:

major

Intron Phase:

Intron Coordinates:

64121123 - 64122669

Intron Length:

1547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

TCAGCTGCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.6

40.7

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

33.2

-1.9

3.5

49.6

46.4

Minor BPS

40.4

-0.7

2.2

49.08

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035768

64120052 - 64122835

2784