Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_64150690_64161679_F

Intron Information:

Intron Rank:

129407

Intron Class:

major

Intron Phase:

Intron Coordinates:

64150690 - 64161679

Intron Length:

10990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATATCCTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

100

1.24

0.5

100

Major PPT

0.58

0.8

74.4

30.4

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

56.1

0.27

1.9

76.34

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028830

64150593 - 64162073

11481