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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6461807_6479701_F

Intron Information:

Intron Rank:

137465

Intron Class:

major

Intron Phase:

Intron Coordinates:

6461807 - 6479701

Intron Length:

17895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTTTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GGTCCATTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

42.1

Major BPS

62.2

0.3

1.2

38.7

Major PPT

81.2

0.7

0.9

81.3

Minor 5ss

32.2

-2

3.1

41.1

45.2

Minor BPS

50.9

0.01

1.9

63.16

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040695

6440166 - 6482484

42319