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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6527500_6530157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6527500 - 6530157

Intron Length:

2658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AGACTTTTATTT

Flanking Amino Acid:

DGFVDQDEYIADMFANEEGG

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.2

0.81

0.8

77.7

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

48.6

-0

1.5

60.87

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005680

6526039 - 6536364

10326