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Intron Name: Anas_platyrhynchos_platyrhynchos_5_660354_660612_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

660354 - 660612

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCAGGGA

5'SS Class:

weak_major

3'SS Sequence:

TGCTTTCTATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATG

Flanking Amino Acid:

KHRKRRATLQEATEAWKKEE

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.3

49.6

41.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.38

1.1

72.7

36.7

Minor 5ss

23.2

-3.1

3.4

30.3

42.8

Minor BPS

72.9

0.58

1.2

71.67

35.7

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020974

659967 - 710419

50453