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Intron Name: Anas_platyrhynchos_platyrhynchos_5_661919_673214_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

661919 - 673214

Intron Length:

11296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTTAATCCT

5'SS Class:

weak_major

3'SS Sequence:

TCTCTGCGAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATCTTTTAACA

Flanking Amino Acid:

RPALVSSDSPNSLSLLGGSD

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.3

54.1

42.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

54.7

0.11

1.2

56.2

Minor 5ss

35.5

-1.6

54.1

42.4

Minor BPS

73.7

0.74

1.1

77.61

32.4

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020974

659967 - 710419

50453