Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_663994_670412_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

663994 - 670412

Intron Length:

6419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCTAT

5'SS Class:

major

3'SS Sequence:

TTTTTCCGGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTCCTTCAATT

Flanking Amino Acid:

STSPALPSRQMTVGKVSCAI

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

67.9

39.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

72.4

0.5

74.3

36.5

Minor 5ss

44.5

-0.6

3.2

64.7

46.6

Minor BPS

62.7

0.48

1.5

77.39

39.6

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000016689

657280 - 710419

53140