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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6710_17147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6710 - 17147

Intron Length:

10438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTTAGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTTCTTTCACC

Flanking Amino Acid:

QMARNIWYFVNKRMTMKINC

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

66.5

44.4

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

34.3

-1.8

2.8

40.2

39.5

Minor BPS

69.6

0.6

1.7

78.83

36.8

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307