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Intron Name: Anas_platyrhynchos_platyrhynchos_5_674502_679295_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

674502 - 679295

Intron Length:

4794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTCTTCTTA

5'SS Class:

weak_minor

3'SS Sequence:

TTTTCAAGCCAAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCTTGCAGG

Flanking Amino Acid:

EERLPLYLSFSTSAGKEQND

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-0.3

1.3

44.7

39.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

59.6

0.22

1.1

41.3

Minor 5ss

56.8

0.23

2.4

74.4

41.8

Minor BPS

47.8

-0.3

2.2

63.65

44.5

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000016689

657280 - 710419

53140