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Intron Name: Anas_platyrhynchos_platyrhynchos_5_674524_675109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

674524 - 675109

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TAAACCTGAGGA

Flanking Amino Acid:

RKGLFGAFEEASGFSSQATS

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

1.1

Major BPS

54.4

0.11

61.4

34.3

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

31.7

-2.1

42.5

44.2

Minor BPS

45.3

-0.3

1.9

55.71

42.4

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032052

657280 - 710419

53140