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Intron Name: Anas_platyrhynchos_platyrhynchos_5_679435_679635_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

679435 - 679635

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGGTTTCA

5'SS Class:

major

3'SS Sequence:

AACTGGTGACAAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAACA

Flanking Amino Acid:

LRAVGFWRLLQNGENNDLCS

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.1

59.2

35.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

46.6

-0.2

1.2

38.3

42.9

Minor 5ss

33.9

-1.8

38.4

41.8

Minor BPS

79.8

0.93

1.2

88.1

28.6

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020974

659967 - 710419

50453