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Intron Name: Anas_platyrhynchos_platyrhynchos_5_679653_679845_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

679653 - 679845

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

GATGGGAGAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

AAAAACTTGATG

Flanking Amino Acid:

LFRGTPLRAVGFWRLLQNGE

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

0.62

65.3

41.5

Major PPT

-0.1

1.2

36.3

43.6

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

47.9

-0.3

1.6

48.33

38.6

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020974

659967 - 710419

50453