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Intron Name: Anas_platyrhynchos_platyrhynchos_5_680046_682217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

680046 - 682217

Intron Length:

2172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTCTCCCTACAG

Flanking Amino Acid:

AIIHRFRPDLIDFDALNEED

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

37.8

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

80.4

0.68

0.8

73.3

31.8

Minor 5ss

35.5

-1.7

3.3

48.1

41.3

Minor BPS

48.5

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016689

657280 - 710419

53140

ENSAPLT00000038926

679736 - 710419

30684

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000020974

659967 - 710419

50453

ENSAPLT00000045999

659967 - 710419

50453