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Intron Name: Anas_platyrhynchos_platyrhynchos_5_682364_682619_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

682364 - 682619

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAACCTA

5'SS Class:

weak_major

3'SS Sequence:

ACTAACTGCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCATCTCGACT

Flanking Amino Acid:

PHQVNPSVNKSDVRPNKLLT

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.2

57.1

41.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

45.6

-0.2

1.7

45.7

40.5

Minor 5ss

38.9

-1.3

3.1

49.2

41.1

Minor BPS

57.8

0.33

1.6

75.76

41.1

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038926

679736 - 710419

30684