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Intron Name: Anas_platyrhynchos_platyrhynchos_5_682637_682762_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

682637 - 682762

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGCTTAAA

5'SS Class:

weak_major

3'SS Sequence:

CTCCTTAGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

GACTCCTTAGTT

Flanking Amino Acid:

NSSCVRPHQVNPSVNKSDVR

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.1

57.3

37.1

Major BPS

0.1

1.1

61.6

34.2

Major PPT

74.8

0.56

0.9

Minor 5ss

30.8

-2.2

2.9

38.1

40.9

Minor BPS

64.1

0.52

1.6

74.01

42.9

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038926

679736 - 710419

30684