Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_6833615_6834454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6833615 - 6834454

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGCTTC

5'SS Class:

major

3'SS Sequence:

TCTTCCCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAG

U12 Branch Point Sequence:

TTTTGTTTGTTT

Flanking Amino Acid:

NLSRHFYCIRKGDIVIAKSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

67.1

39.7

Major BPS

0.08

1.6

43.5

Major PPT

81.3

0.7

73.2

31.7

Minor 5ss

49.1

-0.1

67.4

38.1

Minor BPS

42.8

-0.4

3.6

78.01

39.5

Associated Gene:

Gene:

IMMP1L

Ensembl Gene ID:

ENSAPLG00000004693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041904

6825444 - 6848499

23056

ENSAPLT00000004825

6825444 - 6852003

26560